X-Git-Url: https://git.donarmstrong.com/?a=blobdiff_plain;f=indicatorcommand.h;h=3c24dfb843e770567a1486436536b97fabfe12b5;hb=006601d68abe8d0061f77e8d28323b160750e343;hp=2c36c35f6f3025bb3f07760055512b2e0e257914;hpb=49d2b7459c5027557564b21e9487dadafbbbdc96;p=mothur.git diff --git a/indicatorcommand.h b/indicatorcommand.h index 2c36c35..3c24dfb 100644 --- a/indicatorcommand.h +++ b/indicatorcommand.h @@ -12,7 +12,7 @@ #include "command.hpp" #include "readtree.h" -#include "treemap.h" +#include "counttable.h" #include "sharedrabundvector.h" #include "sharedrabundfloatvector.h" #include "inputdata.h" @@ -36,7 +36,7 @@ public: private: ReadTree* read; - TreeMap* treeMap; + CountTable* ct; GroupMap* designMap; string treefile, sharedfile, relabundfile, groups, label, inputFileName, outputDir, designfile; bool abort;