X-Git-Url: https://git.donarmstrong.com/?a=blobdiff_plain;f=indicatorcommand.h;fp=indicatorcommand.h;h=2c36c35f6f3025bb3f07760055512b2e0e257914;hb=49d2b7459c5027557564b21e9487dadafbbbdc96;hp=c5112e683dbf78a074aa1df6c1978d3b1fb0756d;hpb=ee8403d4eb5760187d62b42a9cf4272de8fc0ec4;p=mothur.git diff --git a/indicatorcommand.h b/indicatorcommand.h index c5112e6..2c36c35 100644 --- a/indicatorcommand.h +++ b/indicatorcommand.h @@ -26,6 +26,7 @@ public: vector setParameters(); string getCommandName() { return "indicator"; } string getCommandCategory() { return "Hypothesis Testing"; } + string getOutputFileNameTag(string, string); string getHelpString(); string getCitation() { return "Dufrene M, Legendre P (1997). Species assemblages and indicator species: The need for a flexible asymmetrical approach. Ecol Monogr 67: 345-66.\n McCune B, Grace JB, Urban DL (2002). Analysis of ecological communities. MjM Software Design: Gleneden Beach, OR. \nLegendre P, Legendre L (1998). Numerical Ecology. Elsevier: New York. \nhttp://www.mothur.org/wiki/Indicator"; } string getDescription() { return "calculate the indicator value for each OTU"; }