X-Git-Url: https://git.donarmstrong.com/?a=blobdiff_plain;f=indicatorcommand.h;fp=indicatorcommand.h;h=1f46081dd464c32e599cf1d173d1eba60df3db46;hb=1a5c2356c1b955c6ec024b2baf9f46377ee7c72e;hp=b058af33b05b2a7a29f3f1e4aede4e22c37cbf7d;hpb=79a7d3273749b08d4f9f8dfe350c964ff0c4351e;p=mothur.git

diff --git a/indicatorcommand.h b/indicatorcommand.h
index b058af3..1f46081 100644
--- a/indicatorcommand.h
+++ b/indicatorcommand.h
@@ -26,8 +26,9 @@ public:
 	vector<string> setParameters();
 	string getCommandName()			{ return "indicator";				}
 	string getCommandCategory()		{ return "Hypothesis Testing";		}
-	string getOutputFileNameTag(string, string);
+	
 	string getHelpString();	
+    string getOutputPattern(string);	
 	string getCitation() { return "Dufrene M, Legendre P (1997). Species assemblages and indicator species: The need for a flexible asymmetrical approach. Ecol Monogr 67: 345-66.\n McCune B, Grace JB, Urban DL (2002). Analysis of ecological communities. MjM Software Design: Gleneden Beach, OR. \nLegendre P, Legendre L (1998). Numerical Ecology. Elsevier: New York. \nhttp://www.mothur.org/wiki/Indicator"; }
 	string getDescription()		{ return "calculate the indicator value for each OTU"; }