X-Git-Url: https://git.donarmstrong.com/?a=blobdiff_plain;f=helpcommand.h;h=aedb7b5a626570f39f16d420ca7bd82a0034f740;hb=3914b0d6480f67df53b1e838f51c4e6155710434;hp=d4e7b1fda16a88f8e88a30a46ba70e50fe1ce290;hpb=8bc3e5b38c2317a1715f53be22fa96455868c281;p=mothur.git

diff --git a/helpcommand.h b/helpcommand.h
index d4e7b1f..aedb7b5 100644
--- a/helpcommand.h
+++ b/helpcommand.h
@@ -19,21 +19,23 @@ class HelpCommand : public Command {
 public:
 	HelpCommand(string);
 	HelpCommand() {}
-	~HelpCommand();
-	vector<string> getRequiredParameters();
-	vector<string> getValidParameters();
-	vector<string> getRequiredFiles();
-	map<string, vector<string> > getOutputFiles() { return outputTypes; }
-	int execute();
-	void help() {};
+	~HelpCommand(){}
 	
-private:
-	CommandFactory* validCommands;
-	vector<string> outputNames;
-	map<string, vector<string> > outputTypes;
+	vector<string> setParameters()	{ return outputNames;	} //dummy, doesn't really do anything	
+	string getCommandName()			{ return "help";		}
+	string getCommandCategory()		{ return "Hidden";		}
+	string getHelpString() { return "For more information about a specific command type 'commandName(help)' i.e. 'cluster(help)'"; }	
+     string getOutputPattern(string) { return "";                }
+	string getCitation() { return "no citation"; }
+	string getDescription()		{ return "help"; }
+
+	int execute(); 
+	void help() { m->mothurOut(getHelpString()); }	
 	
 	
 private:
+	CommandFactory* validCommands;
+	vector<string> outputNames;	
 		
 };