X-Git-Url: https://git.donarmstrong.com/?a=blobdiff_plain;f=helpcommand.h;h=31dbd2b9014ab27a150663a6eff56c63f2f98f8f;hb=49d2b7459c5027557564b21e9487dadafbbbdc96;hp=f6a4aa38570aa047de43839895fc40d30e984fe7;hpb=de2dc9fb831f569b823031d0730f5a0d739e8290;p=mothur.git

diff --git a/helpcommand.h b/helpcommand.h
index f6a4aa3..31dbd2b 100644
--- a/helpcommand.h
+++ b/helpcommand.h
@@ -18,14 +18,24 @@ class HelpCommand : public Command {
 	
 public:
 	HelpCommand(string);
-	~HelpCommand();
-	int execute();
-	void help() {};
+	HelpCommand() {}
+	~HelpCommand(){}
+	
+	vector<string> setParameters()	{ return outputNames;	} //dummy, doesn't really do anything	
+	string getCommandName()			{ return "help";		}
+	string getCommandCategory()		{ return "Hidden";		}
+	string getHelpString() { return "For more information about a specific command type 'commandName(help)' i.e. 'cluster(help)'"; }	
+    string getOutputFileNameTag(string, string) { return "";  }
+	string getCitation() { return "no citation"; }
+	string getDescription()		{ return "help"; }
+
+	int execute(); 
+	void help() { m->mothurOut(getHelpString()); }	
 	
-private:
-	CommandFactory* validCommands;
 	
 private:
+	CommandFactory* validCommands;
+	vector<string> outputNames;	
 		
 };