X-Git-Url: https://git.donarmstrong.com/?a=blobdiff_plain;f=heatmapsimcommand.h;h=7b74880955594da0bb863c4b1755cf32c7b429e7;hb=8e67e9de1b200106bea5a468ac02125954656499;hp=ba5a240c8ade230de7433413cefe1dcfdf930402;hpb=e150b0b0664caec517485ee6d69dcdade6dcae77;p=mothur.git

diff --git a/heatmapsimcommand.h b/heatmapsimcommand.h
index ba5a240..7b74880 100644
--- a/heatmapsimcommand.h
+++ b/heatmapsimcommand.h
@@ -26,9 +26,11 @@ public:
 	vector<string> setParameters();
 	string getCommandName()			{ return "heatmap.sim";				}
 	string getCommandCategory()		{ return "OTU-Based Approaches";	}
+	string getOutputFileNameTag(string, string);
 	string getHelpString();	
 	string getCitation() { return "http://www.mothur.org/wiki/Heatmap.sim"; }
-	
+	string getDescription()		{ return "generate a heatmap indicating the pairwise distance between multiple samples using a variety of calculators"; }
+
 	int execute(); 
 	void help() { m->mothurOut(getHelpString()); }	
 	
@@ -43,6 +45,7 @@ private:
 	set<string> labels; //holds labels to be used
 	string format, groups, label, calc, sharedfile, phylipfile, columnfile, namefile, outputDir, inputfile;
 	vector<string> Estimators, Groups, outputNames;
+	int fontsize;
 	
 	int runCommandShared();
 	int runCommandDist();