X-Git-Url: https://git.donarmstrong.com/?a=blobdiff_plain;f=heatmapcommand.h;h=a85d510074c55a73adc25b07f16a8a81bdd4a30c;hb=d0954e27635712cdbd8b86e3c4510670803a2665;hp=47838d80bb6f8cded11793bc7ed7ef942f9f8ec9;hpb=74844a60d80c6dd06e3fb02ee9b928424f9019b0;p=mothur.git

diff --git a/heatmapcommand.h b/heatmapcommand.h
index 47838d8..a85d510 100644
--- a/heatmapcommand.h
+++ b/heatmapcommand.h
@@ -24,7 +24,12 @@ class HeatMapCommand : public Command {
 
 public:
 	HeatMapCommand(string);
+	HeatMapCommand();
 	~HeatMapCommand();
+	vector<string> getRequiredParameters();
+	vector<string> getValidParameters();
+	vector<string> getRequiredFiles();
+	map<string, vector<string> > getOutputFiles() { return outputTypes; }
 	int execute();
 	void help();
 	
@@ -35,12 +40,15 @@ private:
 	SharedListVector* SharedList;
 	RAbundVector* rabund;
 	vector<SharedRAbundVector*> lookup;
+	vector<SharedRAbundFloatVector*> lookupFloat;
 	HeatMap* heatmap;
 
 	bool abort, allLines;
 	set<string> labels; //holds labels to be used
 	string format, groups, sorted, scale, label, outputDir;
 	vector<string> Groups, outputNames;
+	map<string, vector<string> > outputTypes;
+	int numOTU, fontSize;
 
 
 };