X-Git-Url: https://git.donarmstrong.com/?a=blobdiff_plain;f=heatmap.h;h=ffbe94675df2dc8b968134ad79ffc7307bb1d458;hb=905cc2b0bd18c5ce611b048d785e93859865a5ea;hp=54035f0cb4aba4e595183d3f8b6ae9e0ce256bc9;hpb=51cf89e90eef8b300c2786eb1560dd89e6e83445;p=mothur.git

diff --git a/heatmap.h b/heatmap.h
index 54035f0..ffbe946 100644
--- a/heatmap.h
+++ b/heatmap.h
@@ -9,45 +9,37 @@
  *
  */
 
-using namespace std;
-
-#include "ordervector.hpp"
 #include "rabundvector.hpp"
 #include "sharedrabundvector.h"
-#include "sharedordervector.h"
 #include "datavector.hpp"
 #include "globaldata.hpp"
-#include "sharedutilities.h"
 
 /***********************************************************************/
 
 class HeatMap {
 	
 	public:
-		HeatMap();
-		~HeatMap(){ delete util; };
+		HeatMap(string, string, string);
+		~HeatMap(){};
 	
-		void getPic(OrderVector*);
-		void getPic(SharedOrderVector*);
+		string getPic(RAbundVector*);
+		string getPic(vector<SharedRAbundVector*>);
 
 	private:
-		void sortSharedVectors();
+		void sortSharedVectors(vector<SharedRAbundVector*>& );
 		void printLegend(int, float);
-		
+
 		GlobalData* globaldata;
-		SharedUtil* util;
-		vector<SharedRAbundVector*> lookup;
-		RAbundVector rabund;
-		string format, sorted, groupComb, scaler;
+		string format, sorted, groupComb, scaler, outputDir;
 		ofstream outsvg;
-		map<float, string> colorScale;
-		map<float, string>::iterator it;
-
+		MothurOut* m;
 			
 };
+
 /***********************************************************************/
 
 #endif
 
 
 
+