X-Git-Url: https://git.donarmstrong.com/?a=blobdiff_plain;f=hclustercommand.h;h=d1074070420fc89347a65b8fa8c0448c953c8881;hb=bd27c2b0612942815b7417c79f7ee41f669a2a34;hp=6bf559ae6937f130679a5b601e939d7b79193acc;hpb=f687723a8357916e86a05116978e6869b039ce36;p=mothur.git diff --git a/hclustercommand.h b/hclustercommand.h index 6bf559a..d107407 100644 --- a/hclustercommand.h +++ b/hclustercommand.h @@ -38,8 +38,9 @@ public: vector setParameters(); string getCommandName() { return "hcluster"; } string getCommandCategory() { return "Clustering"; } - string getOutputFileNameTag(string, string); + string getHelpString(); + string getOutputPattern(string); string getCitation() { return "Sun Y, Cai Y, Liu L, Yu F, Farrell ML, Mckendree W, Farmerie W (2009). ESPRIT: estimating species richness using large collections of 16S rRNA pyrosequences. Nucleic Acids Res 37: e76. \nhttp://www.mothur.org/wiki/Hcluster"; } string getDescription() { return "cluster your sequences into OTUs using a distance matrix"; }