X-Git-Url: https://git.donarmstrong.com/?a=blobdiff_plain;f=hcluster.cpp;fp=hcluster.cpp;h=9466483c779ce0b32698c8469c6224ea3c63b724;hb=5c80ce8b80938d41cf6c64a017fa6fd50d45de5b;hp=07deaa5991c94627fa2e02a88e3b10b2729e290e;hpb=62cdb3eb996664abdb8fee21bf4a329cd0694867;p=mothur.git

diff --git a/hcluster.cpp b/hcluster.cpp
index 07deaa5..9466483 100644
--- a/hcluster.cpp
+++ b/hcluster.cpp
@@ -452,7 +452,7 @@ vector<seqDist> HCluster::getSeqsAN(){
 			if (distance != -1) { //-1 means skip me
 				seqDist temp(firstName, secondName, distance);
 				sameSeqs.push_back(temp);
-			}
+			}else{ distance = 10000; }
 		}
 		
 		if (mergedMinDist < distance) { //get minimum distance from mergedMin