X-Git-Url: https://git.donarmstrong.com/?a=blobdiff_plain;f=groupmap.cpp;fp=groupmap.cpp;h=9d2736405f8e306dc8e5238f8bad1a26b92b88bb;hb=9bbd9b071066b7b11c1ab95aa01942abc933e0fb;hp=8e2139db771010d1b372ccfdc0a6a0523c6e4849;hpb=af0a94ea8f02421b2b73e77e68753a2b4c37768e;p=mothur.git

diff --git a/groupmap.cpp b/groupmap.cpp
index 8e2139d..9d27364 100644
--- a/groupmap.cpp
+++ b/groupmap.cpp
@@ -372,6 +372,22 @@ bool GroupMap::isValidGroup(string groupname) {
 	}
 }
 /************************************************************/
+int GroupMap::getCopy(GroupMap* g) {
+	try {
+        vector<string> names = g->getNamesSeqs();
+        for (int i = 0; i < names.size(); i++) {
+            if (m->control_pressed) { break; }
+            string group = g->getGroup(names[i]);
+            setGroup(names[i], group);
+        }
+        return names.size();
+	}
+	catch(exception& e) {
+		m->errorOut(e, "GroupMap", "getCopy");
+		exit(1);
+	}
+}
+/************************************************************/
 int GroupMap::getNumSeqs(string group) {
 	try {