X-Git-Url: https://git.donarmstrong.com/?a=blobdiff_plain;f=getsharedotucommand.h;h=583c2e001a00607cd97771e8fdfa42cbd8866c9f;hb=55bbd10379db27def51cec72a8819d775f73e45b;hp=d7ffef3c74b965967dd6f68d7a6914183ec2253f;hpb=e150b0b0664caec517485ee6d69dcdade6dcae77;p=mothur.git diff --git a/getsharedotucommand.h b/getsharedotucommand.h index d7ffef3..583c2e0 100644 --- a/getsharedotucommand.h +++ b/getsharedotucommand.h @@ -28,9 +28,12 @@ class GetSharedOTUCommand : public Command { string getCommandName() { return "get.sharedseqs"; } string getCommandCategory() { return "OTU-Based Approaches"; } string getRequiredCommand() { return "none"; } - string getHelpString(); + + string getHelpString(); + string getOutputPattern(string); string getCitation() { return "http://www.mothur.org/wiki/Get.sharedseqs"; } - + string getDescription() { return "identifies sequences that are either unique or shared by specific groups"; } + int execute(); void help() { m->mothurOut(getHelpString()); }