X-Git-Url: https://git.donarmstrong.com/?a=blobdiff_plain;f=getsharedotucommand.h;h=583c2e001a00607cd97771e8fdfa42cbd8866c9f;hb=367747fb506bf228d3b2d645868d275ba0714e90;hp=27a57b0242a92c95f694a941b4e2c05ed465c384;hpb=ca9ac1d80c62f57270b0dcd49410ebe08a8aecd6;p=mothur.git diff --git a/getsharedotucommand.h b/getsharedotucommand.h index 27a57b0..583c2e0 100644 --- a/getsharedotucommand.h +++ b/getsharedotucommand.h @@ -28,8 +28,12 @@ class GetSharedOTUCommand : public Command { string getCommandName() { return "get.sharedseqs"; } string getCommandCategory() { return "OTU-Based Approaches"; } string getRequiredCommand() { return "none"; } - string getHelpString(); - + + string getHelpString(); + string getOutputPattern(string); + string getCitation() { return "http://www.mothur.org/wiki/Get.sharedseqs"; } + string getDescription() { return "identifies sequences that are either unique or shared by specific groups"; } + int execute(); void help() { m->mothurOut(getHelpString()); }