X-Git-Url: https://git.donarmstrong.com/?a=blobdiff_plain;f=getseqscommand.h;h=9d8e7960f5c2e949f021602aaf1aa36e7d3e82e0;hb=14edc148cb299c5624f72bb681375b704aa74f43;hp=809109c486de9f00b39091b863da8a23dfc95a96;hpb=74844a60d80c6dd06e3fb02ee9b928424f9019b0;p=mothur.git diff --git a/getseqscommand.h b/getseqscommand.h index 809109c..9d8e796 100644 --- a/getseqscommand.h +++ b/getseqscommand.h @@ -24,15 +24,16 @@ class GetSeqsCommand : public Command { private: set names; vector outputNames; - string accnosfile, fastafile, namefile, groupfile, alignfile, listfile, outputDir; + string accnosfile, fastafile, namefile, groupfile, alignfile, listfile, taxfile, outputDir; bool abort; - void readFasta(); - void readName(); - void readGroup(); - void readAlign(); - void readAccnos(); - void readList(); + int readFasta(); + int readName(); + int readGroup(); + int readAlign(); + int readAccnos(); + int readList(); + int readTax(); };