X-Git-Url: https://git.donarmstrong.com/?a=blobdiff_plain;f=getseqscommand.h;h=809109c486de9f00b39091b863da8a23dfc95a96;hb=74844a60d80c6dd06e3fb02ee9b928424f9019b0;hp=2bd0754b93715a347e517d7b11be3bf8f478e944;hpb=c53c53b0280452e1c3a087fbf807b2e508cd66c4;p=mothur.git

diff --git a/getseqscommand.h b/getseqscommand.h
index 2bd0754..809109c 100644
--- a/getseqscommand.h
+++ b/getseqscommand.h
@@ -16,14 +16,15 @@ class GetSeqsCommand : public Command {
 	
 	public:
 	
-		GetSeqsCommand(string);	
+		GetSeqsCommand(string);
 		~GetSeqsCommand(){};
 		int execute();
 		void help();	
 		
 	private:
 		set<string> names;
-		string accnosfile, fastafile, namefile, groupfile, alignfile;
+		vector<string> outputNames;
+		string accnosfile, fastafile, namefile, groupfile, alignfile, listfile, outputDir;
 		bool abort;
 		
 		void readFasta();
@@ -31,6 +32,7 @@ class GetSeqsCommand : public Command {
 		void readGroup();
 		void readAlign();
 		void readAccnos();
+		void readList();
 		
 };