X-Git-Url: https://git.donarmstrong.com/?a=blobdiff_plain;f=getseqscommand.h;fp=getseqscommand.h;h=ea93b5a1c4e0427cc43157a5d77f995bb3f2308b;hb=8bc3e5b38c2317a1715f53be22fa96455868c281;hp=4f4c809e51e7f9308ae4f372bdd2195eb964f6c3;hpb=f663afa231c9bc1b5e18e0ea3bdd2b2ee784f5b2;p=mothur.git

diff --git a/getseqscommand.h b/getseqscommand.h
index 4f4c809..ea93b5a 100644
--- a/getseqscommand.h
+++ b/getseqscommand.h
@@ -17,7 +17,12 @@ class GetSeqsCommand : public Command {
 	public:
 	
 		GetSeqsCommand(string);
+		GetSeqsCommand();
 		~GetSeqsCommand(){};
+		vector<string> getRequiredParameters();
+		vector<string> getValidParameters();
+		vector<string> getRequiredFiles();
+		map<string, vector<string> > getOutputFiles() { return outputTypes; }
 		int execute();
 		void help();	
 		
@@ -26,6 +31,7 @@ class GetSeqsCommand : public Command {
 		vector<string> outputNames;
 		string accnosfile, fastafile, namefile, groupfile, alignfile, listfile, taxfile, outputDir;
 		bool abort, dups;
+		map<string, vector<string> > outputTypes;
 		
 		int readFasta();
 		int readName();