X-Git-Url: https://git.donarmstrong.com/?a=blobdiff_plain;f=getseqscommand.cpp;h=9f2b5060fcaa715f9a2fd3fc484ba585d6322da9;hb=fa08e82ec2dd48f73d051c210dad54a403308949;hp=a16accbb8ac724b1fce6579a7bcad9b2f5b261c7;hpb=3b137af694d322b7162e97275c070c41b42597a3;p=mothur.git

diff --git a/getseqscommand.cpp b/getseqscommand.cpp
index a16accb..9f2b506 100644
--- a/getseqscommand.cpp
+++ b/getseqscommand.cpp
@@ -188,8 +188,7 @@ GetSeqsCommand::GetSeqsCommand(string option)  {
 			if (accnosfile == "not open") { abort = true; }
 			else if (accnosfile == "not found") {  accnosfile = "";  m->mothurOut("You must provide an accnos file."); m->mothurOutEndLine(); abort = true; }	
 			
-			accnosfile2 = validParameter.validFile(parameters, "accnos2", true);
-			if (accnosfile2 == "not open") { abort = true; }
+			if (accnosfile2 == "not found") { accnosfile2 = ""; }
 			
 			fastafile = validParameter.validFile(parameters, "fasta", true);
 			if (fastafile == "not open") { abort = true; }