X-Git-Url: https://git.donarmstrong.com/?a=blobdiff_plain;f=getseqscommand.cpp;h=287f5a6acdc08a9c40b6e2e12b159a2f83fc9636;hb=c48d91112209b841444923670dca5454da0e2a4d;hp=480bde3222c9057aafecacc208d84eac24573b72;hpb=196c22d0f93ba48e8ec54ab76608b6e3ba5e68cc;p=mothur.git

diff --git a/getseqscommand.cpp b/getseqscommand.cpp
index 480bde3..287f5a6 100644
--- a/getseqscommand.cpp
+++ b/getseqscommand.cpp
@@ -501,7 +501,7 @@ int GetSeqsCommand::readQual(){
 				saveName = name.substr(1);
 				while (!in.eof())	{	
 					char c = in.get(); 
-					if (c == 10 || c == 13){	break;	}
+					if (c == 10 || c == 13 || c == -1){	break;	}
 					else { name += c; }	
 				} 
 				m->gobble(in);