X-Git-Url: https://git.donarmstrong.com/?a=blobdiff_plain;f=getrelabundcommand.h;h=9725a31ab546f0829ec4ca0bf370e6792fdfeadf;hb=762b3e4c83e1e8e8392c1199b6482d36ee89e50f;hp=aa123a4f24e73c8b9a1dc94449e2acccbfc003cb;hpb=1dc7ed939c314b3057dad3a834e9739fb7ecfbe6;p=mothur.git

diff --git a/getrelabundcommand.h b/getrelabundcommand.h
index aa123a4..9725a31 100644
--- a/getrelabundcommand.h
+++ b/getrelabundcommand.h
@@ -31,12 +31,13 @@ private:
 	InputData* input;
 	vector<SharedRAbundVector*> lookup;
 	
-	bool abort, allLines;
+	bool abort, allLines, pickedGroups;
 	set<string> labels; //holds labels to be used
 	string groups, label, outputDir, scale;
 	vector<string> Groups;
 	
-	int getRelAbundance(vector<SharedRAbundVector*>, ofstream&);
+	int getRelAbundance(vector<SharedRAbundVector*>&, ofstream&);
+	int eliminateZeroOTUS(vector<SharedRAbundVector*>& thislookup);
 
 };