X-Git-Url: https://git.donarmstrong.com/?a=blobdiff_plain;f=getrelabundcommand.cpp;fp=getrelabundcommand.cpp;h=8c28c47b220e1554972d3cdb97bd2218af4f1c77;hb=191ae1be0679d5cf4eda950b3b1bf26fb7dd503d;hp=5b9327b57bd928a5e456a7251a83be1a0664cd6c;hpb=fc9bc621a09de13eb76ca4f5cee930b03de43dcd;p=mothur.git

diff --git a/getrelabundcommand.cpp b/getrelabundcommand.cpp
index 5b9327b..8c28c47 100644
--- a/getrelabundcommand.cpp
+++ b/getrelabundcommand.cpp
@@ -24,6 +24,7 @@ vector<string> GetRelAbundCommand::getValidParameters(){
 //**********************************************************************************************************************
 GetRelAbundCommand::GetRelAbundCommand(){	
 	try {
+		abort = true;
 		//initialize outputTypes
 		vector<string> tempOutNames;
 		outputTypes["relabund"] = tempOutNames;