X-Git-Url: https://git.donarmstrong.com/?a=blobdiff_plain;f=getrabundcommand.h;fp=getrabundcommand.h;h=e853ac5f913a1d758e7a633510478ad30449feec;hb=8bc3e5b38c2317a1715f53be22fa96455868c281;hp=ed51be12ca9e9c0a41b9c03a5089cd9fce7b3893;hpb=f663afa231c9bc1b5e18e0ea3bdd2b2ee784f5b2;p=mothur.git

diff --git a/getrabundcommand.h b/getrabundcommand.h
index ed51be1..e853ac5 100644
--- a/getrabundcommand.h
+++ b/getrabundcommand.h
@@ -21,7 +21,12 @@ class GlobalData;
 class GetRAbundCommand : public Command {
 public:
 	GetRAbundCommand(string);
+	GetRAbundCommand();
 	~GetRAbundCommand();
+	vector<string> getRequiredParameters();
+	vector<string> getValidParameters();
+	vector<string> getRequiredFiles();
+	map<string, vector<string> > getOutputFiles() { return outputTypes; }
 	int execute();
 	void help();
 	
@@ -33,6 +38,8 @@ private:
 	InputData* input;
 	ListVector* list;
 	RAbundVector* rabund;
+	vector<string> outputNames;
+	map<string, vector<string> > outputTypes;
 
 	bool abort, allLines, sorted;
 	set<string> labels; //holds labels to be used