X-Git-Url: https://git.donarmstrong.com/?a=blobdiff_plain;f=getrabundcommand.h;fp=getrabundcommand.h;h=66a3211296edc7f2105af0ba2bfc10f85b7ae109;hb=0024441c1ff9a98467ba53cc7420a37c98f32e86;hp=0000000000000000000000000000000000000000;hpb=5b7ac70116137b52dd7884b76c5bca660a5fea38;p=mothur.git

diff --git a/getrabundcommand.h b/getrabundcommand.h
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+#ifndef GETRABUNDCOMMAND_H
+#define GETRABUNDCOMMAND_H
+
+/*
+ *  getrabundcommand.h
+ *  Mothur
+ *
+ *  Created by Sarah Westcott on 6/2/09.
+ *  Copyright 2009 Schloss Lab UMASS Amherst. All rights reserved.
+ *
+ */
+
+
+#include "command.hpp"
+#include "inputdata.h"
+#include "readotu.h"
+#include "listvector.hpp"
+
+class GlobalData;
+
+class GetRAbundCommand : public Command {
+public:
+	GetRAbundCommand();
+	~GetRAbundCommand();
+	int execute();
+	
+private:
+	GlobalData* globaldata;
+	string filename;
+	ofstream out;
+	ReadOTUFile* read;
+	InputData* input;
+	ListVector* list;
+	RAbundVector* rabund;
+};
+
+#endif
+