X-Git-Url: https://git.donarmstrong.com/?a=blobdiff_plain;f=getlineagecommand.h;h=68f974f21461933b8feed0657bc07f86c17b4e20;hb=b0997605981902442138b9309e9c43d95c3ba10a;hp=99bc0fa347313bb023e8bd1b41a5c3e2be5c93ed;hpb=90708fe9701e3827e477c82fb3652539c3bf2a0d;p=mothur.git diff --git a/getlineagecommand.h b/getlineagecommand.h index 99bc0fa..68f974f 100644 --- a/getlineagecommand.h +++ b/getlineagecommand.h @@ -23,8 +23,9 @@ class GetLineageCommand : public Command { vector setParameters(); string getCommandName() { return "get.lineage"; } string getCommandCategory() { return "Phylotype Analysis"; } - string getOutputFileNameTag(string, string); + string getHelpString(); + string getOutputPattern(string); string getCitation() { return "http://www.mothur.org/wiki/Get.lineage"; } string getDescription() { return "gets sequences from a list, fasta, name, group, alignreport or taxonomy file from a given taxonomy or set of taxonomies"; }