X-Git-Url: https://git.donarmstrong.com/?a=blobdiff_plain;f=getlineagecommand.cpp;h=b895cc4fc62bfb49346c96df7a0d6371dd2b4a50;hb=1a968f34ae2d2680eaf189a197d1a21b8dfd6c03;hp=438aa3808441e60b9fb4fa22d4e9313a58956b2a;hpb=1a5c2356c1b955c6ec024b2baf9f46377ee7c72e;p=mothur.git

diff --git a/getlineagecommand.cpp b/getlineagecommand.cpp
index 438aa38..b895cc4 100644
--- a/getlineagecommand.cpp
+++ b/getlineagecommand.cpp
@@ -444,7 +444,7 @@ int GetLineageCommand::readCount(){
         //check for groups that have been eliminated
         CountTable ct;
         if (ct.testGroups(outputFileName)) {
-            ct.readTable(outputFileName);
+            ct.readTable(outputFileName, true);
             ct.printTable(outputFileName);
         }