X-Git-Url: https://git.donarmstrong.com/?a=blobdiff_plain;f=getlabelcommand.h;fp=getlabelcommand.h;h=c5dc1a119969e3ac10b0462c4ad5090bee1333f3;hb=0caf3fbabaa3ece404f8ce77f4c883dc5b1bf1dc;hp=0000000000000000000000000000000000000000;hpb=1b73ff67c83892a025e597dabd9df6fe7b58206a;p=mothur.git

diff --git a/getlabelcommand.h b/getlabelcommand.h
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+#ifndef GETLABELCOMMAND_H
+#define GETLABELCOMMAND_H
+
+/*
+ *  getlabelcommand.h
+ *  Mothur
+ *
+ *  Created by Thomas Ryabin on 1/30/09.
+ *  Copyright 2009 Schloss Lab UMASS Amherst. All rights reserved.
+ *
+ */
+
+#include "command.hpp"
+#include "ordervector.hpp"
+#include "inputdata.h"
+
+
+class GetlabelCommand : public Command {
+public:
+	GetlabelCommand(string);
+	GetlabelCommand();
+	~GetlabelCommand(){}
+	
+	vector<string> setParameters();
+	string getCommandName()			{ return "get.label";				}
+	string getCommandCategory()		{ return "OTU-Based Approaches";	}
+	string getHelpString();	
+	string getCitation() { return "http://www.mothur.org/wiki/Get.label"; }
+	string getDescription()		{ return "outputs labels"; }
+
+	
+	int execute(); 
+	void help() { m->mothurOut(getHelpString()); }	
+	
+	
+private:
+	string inputfile, listfile, rabundfile, sabundfile, format;
+	bool abort;
+	vector<string> outputNames;
+};
+
+#endif