X-Git-Url: https://git.donarmstrong.com/?a=blobdiff_plain;f=getgroupscommand.h;fp=getgroupscommand.h;h=80230b49b9872ab4633dbd2d4120826b3cc1ee82;hb=49d2b7459c5027557564b21e9487dadafbbbdc96;hp=224f4f07ea1c45d3e734d8f6406e8a17f40fd1fd;hpb=ee8403d4eb5760187d62b42a9cf4272de8fc0ec4;p=mothur.git diff --git a/getgroupscommand.h b/getgroupscommand.h index 224f4f0..80230b4 100644 --- a/getgroupscommand.h +++ b/getgroupscommand.h @@ -25,6 +25,7 @@ public: vector setParameters(); string getCommandName() { return "get.groups"; } string getCommandCategory() { return "OTU-Based Approaches"; } + string getOutputFileNameTag(string, string); string getHelpString(); string getCitation() { return "http://www.mothur.org/wiki/Get.groups"; } string getDescription() { return "gets sequences from a list, fasta, name, group, shared, design or taxonomy file from a given group or set of groups"; } @@ -47,7 +48,6 @@ private: int readFasta(); int readName(); int readGroup(); - void readAccnos(); int readList(); int readTax(); int fillNames();