X-Git-Url: https://git.donarmstrong.com/?a=blobdiff_plain;f=getgroupcommand.h;h=bc805bdc7ef5363b3c300b4bc980f535704ee0f7;hb=c5f38b0c83719306fd2e5a7a83e04988b1853f62;hp=00c1b51936009de1fb24d5fa227cc40c3c5325dd;hpb=5e7c1cf6a6dd289a90d27c0eef7eb4675b5e17b7;p=mothur.git

diff --git a/getgroupcommand.h b/getgroupcommand.h
index 00c1b51..bc805bd 100644
--- a/getgroupcommand.h
+++ b/getgroupcommand.h
@@ -6,26 +6,28 @@
  *  Mothur
  *
  *  Created by Thomas Ryabin on 2/2/09.
- *  Copyright 2009 __MyCompanyName__. All rights reserved.
+ *  Copyright 2009 Schloss Lab UMASS Amherst. All rights reserved.
  *
  */
 
-#include <iostream>
-#include <fstream>
 #include "command.hpp"
-#include "readmatrix.hpp"
-
-class GlobalData;
+#include "globaldata.hpp"
 
 class GetgroupCommand : public Command {
 public:
-	GetgroupCommand();
+	GetgroupCommand(string);
 	~GetgroupCommand();
 	int execute();
+	void help();
 	
 private:
 	GlobalData* globaldata;
 	GroupMap* groupMap;
+	string outputFile, sharedfile;
+	ofstream out;
+	ifstream in;
+	bool abort;
+
 };
 
 #endif