X-Git-Url: https://git.donarmstrong.com/?a=blobdiff_plain;f=getgroupcommand.h;h=bc805bdc7ef5363b3c300b4bc980f535704ee0f7;hb=8f7164a88df624fd0a8d1eddbb3d744463cc9ecb;hp=b29673529cca9387ed4a5916166180e0a9966ead;hpb=bfbc55964f1977da72c2cea984288a427d370a59;p=mothur.git

diff --git a/getgroupcommand.h b/getgroupcommand.h
index b296735..bc805bd 100644
--- a/getgroupcommand.h
+++ b/getgroupcommand.h
@@ -6,24 +6,28 @@
  *  Mothur
  *
  *  Created by Thomas Ryabin on 2/2/09.
- *  Copyright 2009 __MyCompanyName__. All rights reserved.
+ *  Copyright 2009 Schloss Lab UMASS Amherst. All rights reserved.
  *
  */
 
 #include "command.hpp"
-#include "readmatrix.hpp"
-
-class GlobalData;
+#include "globaldata.hpp"
 
 class GetgroupCommand : public Command {
 public:
-	GetgroupCommand();
+	GetgroupCommand(string);
 	~GetgroupCommand();
 	int execute();
+	void help();
 	
 private:
 	GlobalData* globaldata;
 	GroupMap* groupMap;
+	string outputFile, sharedfile;
+	ofstream out;
+	ifstream in;
+	bool abort;
+
 };
 
 #endif