X-Git-Url: https://git.donarmstrong.com/?a=blobdiff_plain;f=getgroupcommand.cpp;h=2847db149ac5e40defdbfdedfd9d99ae3df5d583;hb=191ae1be0679d5cf4eda950b3b1bf26fb7dd503d;hp=40bfb26c6a21cfd29368720ef91782e8cd638ac6;hpb=8bc3e5b38c2317a1715f53be22fa96455868c281;p=mothur.git

diff --git a/getgroupcommand.cpp b/getgroupcommand.cpp
index 40bfb26..2847db1 100644
--- a/getgroupcommand.cpp
+++ b/getgroupcommand.cpp
@@ -24,6 +24,7 @@ vector<string> GetgroupCommand::getValidParameters(){
 //**********************************************************************************************************************
 GetgroupCommand::GetgroupCommand(){	
 	try {
+		abort = true;
 		//initialize outputTypes
 		vector<string> tempOutNames;
 		outputTypes["bootgroup"] = tempOutNames;