X-Git-Url: https://git.donarmstrong.com/?a=blobdiff_plain;f=flowdata.h;fp=flowdata.h;h=0000000000000000000000000000000000000000;hb=4a877efa127e56e81a21f53cfdbbfd3bfbe8c4ff;hp=100765370ca5429e75b8688a6abc51d79f17edc5;hpb=a6cf29fa4dac0909c7582cb1094151d34093ee76;p=mothur.git diff --git a/flowdata.h b/flowdata.h deleted file mode 100644 index 1007653..0000000 --- a/flowdata.h +++ /dev/null @@ -1,43 +0,0 @@ -#ifndef FLOWDATA_H -#define FLOWDATA_H - -/* - * flowdata.h - * Mothur - * - * Created by Pat Schloss on 12/22/10. - * Copyright 2010 Schloss Lab. All rights reserved. - * - */ - -#include "mothur.h" -#include "mothurout.h" -#include "sequence.hpp" - -class FlowData { - -public: - FlowData(); - FlowData(int, float, float, int, string); - ~FlowData(); - bool getNext(ifstream&); - string getName(); - void capFlows(int); - bool hasMinFlows(int); - Sequence getSequence(); - - void printFlows(ofstream&); - void printFlows(ofstream&, string); -private: - MothurOut* m; - - void updateEndFlow(); - void translateFlow(); - float signalIntensity, noiseIntensity; - int maxHomoP; - string seqName, locationString, sequence, baseFlow; - int numFlows, maxFlows, endFlow; - vector flowData; -}; - -#endif