X-Git-Url: https://git.donarmstrong.com/?a=blobdiff_plain;f=filterseqscommand.cpp;h=6041c95d59952fbaf1c856055181d4e145c3a9c0;hb=aca78ed4a47dff8672ea8fd93cef0dfbaf0f7495;hp=4ac3381d384edf1979f78c911381e040666b8afe;hpb=d1faab5efe1c28700890bdec5b4d8e817fa1dab2;p=mothur.git

diff --git a/filterseqscommand.cpp b/filterseqscommand.cpp
index 4ac3381..6041c95 100644
--- a/filterseqscommand.cpp
+++ b/filterseqscommand.cpp
@@ -653,18 +653,18 @@ int FilterSeqsCommand::createProcessesRunFilter(string F, string filename, strin
 		
 		//loop through and create all the processes you want
 		while (process != processors) {
-			int pid = fork();
+			pid_t pid = fork();
 			
 			if (pid > 0) {
 				processIDS.push_back(pid);  //create map from line number to pid so you can append files in correct order later
 				process++;
 			}else if (pid == 0){
-				string filteredFasta = filename + toString(getpid()) + ".temp";
+				string filteredFasta = filename + m->mothurGetpid(process) + ".temp";
 				num = driverRunFilter(F, filteredFasta, filename, lines[process]);
 				
 				//pass numSeqs to parent
 				ofstream out;
-				string tempFile = filename +  toString(getpid()) + ".num.temp";
+				string tempFile = filename +  m->mothurGetpid(process) + ".num.temp";
 				m->openOutputFile(tempFile, out);
 				out << num << endl;
 				out.close();
@@ -1079,7 +1079,7 @@ int FilterSeqsCommand::createProcessesCreateFilter(Filters& F, string filename)
 				
 		//loop through and create all the processes you want
 		while (process != processors) {
-			int pid = fork();
+			pid_t pid = fork();
 			
 			if (pid > 0) {
 				processIDS.push_back(pid);  //create map from line number to pid so you can append files in correct order later
@@ -1095,7 +1095,7 @@ int FilterSeqsCommand::createProcessesCreateFilter(Filters& F, string filename)
 				num = driverCreateFilter(F, filename, lines[process]);
 				
 				//write out filter counts to file
-				filename += toString(getpid()) + "filterValues.temp";
+				filename += m->mothurGetpid(process) + "filterValues.temp";
 				ofstream out;
 				m->openOutputFile(filename, out);