X-Git-Url: https://git.donarmstrong.com/?a=blobdiff_plain;f=examples%2FMakefile;fp=examples%2FMakefile;h=2733a573ffbecc5a33599bb9e7425b7f9d3be994;hb=d14782f26230244039bf38f6384a7a9106b0daed;hp=96a4e7ed96d14ebf38013ff60216d6cda25bfa49;hpb=63af098c78ef4163356c281e87bfb467adc8824d;p=samtools.git diff --git a/examples/Makefile b/examples/Makefile index 96a4e7e..2733a57 100644 --- a/examples/Makefile +++ b/examples/Makefile @@ -19,7 +19,7 @@ ex1a.bam:ex1.bam ex1b.bam:ex1.bam ../samtools view -h ex1.bam | awk 'BEGIN{FS=OFS="\t"}{if(/^@/)print;else{$$1=$$1"b";print}}' | ../samtools view -bS - > $@ ex1f.rg: - (echo "@RG ID:ex1 LB:ex1"; echo "@RG ID:ex1a LB:ex1"; echo "@RG ID:ex1b LB:ex1b") > $@ + (echo "@RG ID:ex1 LB:ex1 SM:ex1"; echo "@RG ID:ex1a LB:ex1 SM:ex1"; echo "@RG ID:ex1b LB:ex1b SM:ex1b") > $@ ex1f.bam:ex1.bam ex1a.bam ex1b.bam ex1f.rg ../samtools merge -rh ex1f.rg $@ ex1.bam ex1a.bam ex1b.bam ex1f-rmduppe.bam:ex1f.bam