X-Git-Url: https://git.donarmstrong.com/?a=blobdiff_plain;f=engine.hpp;h=0020a7f8d9d83a24b5b24c60fb0f86263edd5e44;hb=84f93a9e670eb7f7e69e0468b9be4c53890c07f2;hp=d3f156e533a6a759bab014250dd1d54ad1726c7b;hpb=c82900be3ceed3d9bc491bdc98b1819ef85c1af7;p=mothur.git

diff --git a/engine.hpp b/engine.hpp
index d3f156e..0020a7f 100644
--- a/engine.hpp
+++ b/engine.hpp
@@ -17,6 +17,7 @@
 #include "commandoptionparser.hpp"
 #include "command.hpp"
 #include "commandfactory.hpp"
+#include "mothurout.h"
 
 class GlobalData;
 
@@ -26,10 +27,15 @@ public:
 	virtual ~Engine(){}
 	virtual bool getInput() = 0;
 	virtual string getCommand();
-	vector<string> getOptions() {	return options;		}
+	virtual string getOutputDir()			{	return cFactory->getOutputDir();	}
+	virtual string getLogFileName()			{	return cFactory->getLogfileName(); 	}
+	virtual bool getAppend()				{	return cFactory->getAppend();		}
+
+	vector<string> getOptions()		{	return options;		}
 protected:
 	vector<string> options;
 	CommandFactory* cFactory;
+	MothurOut* mout;
 };