X-Git-Url: https://git.donarmstrong.com/?a=blobdiff_plain;f=engine.cpp;h=df65678912b1f3bd112e630b13ef934eebc5e219;hb=753dc84cf289b1d5dc0ca5b0c043640927aa951a;hp=b0371378c29d72a7b37717e5c5d43cbc8f6ef23c;hpb=de2dc9fb831f569b823031d0730f5a0d739e8290;p=mothur.git

diff --git a/engine.cpp b/engine.cpp
index b037137..df65678 100644
--- a/engine.cpp
+++ b/engine.cpp
@@ -169,6 +169,7 @@ bool BatchEngine::getInput(){
 				}else {		cout << "Invalid." << endl;		}
 				
 			}
+			gobble(inputBatchFile);
 		}
 		return 1;
 	}