X-Git-Url: https://git.donarmstrong.com/?a=blobdiff_plain;f=degapseqscommand.h;h=342cd366cd53ce4b8300e2f7d5cd748b04a21668;hb=e339f9008daa7d37c9a9034829565620a6abe783;hp=192d6eb7397e143e5ff91389ca37a5be98857a6e;hpb=4ee9d3c973fb056f3105c26306da3b5d7dfb8108;p=mothur.git

diff --git a/degapseqscommand.h b/degapseqscommand.h
index 192d6eb..342cd36 100644
--- a/degapseqscommand.h
+++ b/degapseqscommand.h
@@ -16,9 +16,18 @@
 class DegapSeqsCommand : public Command {
 public:
 	DegapSeqsCommand(string);
-	~DegapSeqsCommand();
-	int execute();
-	void help();
+	DegapSeqsCommand();
+	~DegapSeqsCommand(){}
+	
+	vector<string> setParameters();
+	string getCommandName()			{ return "degap.seqs";		}
+	string getCommandCategory()		{ return "Sequence Processing";		}
+	string getHelpString();	
+	string getCitation() { return "http://www.mothur.org/wiki/Degap.seqs"; }
+	string getDescription()		{ return "removes gap characters from sequences"; }
+
+	int execute(); 
+	void help() { m->mothurOut(getHelpString()); }	
 	
 private: