X-Git-Url: https://git.donarmstrong.com/?a=blobdiff_plain;f=degapseqscommand.h;fp=degapseqscommand.h;h=0000000000000000000000000000000000000000;hb=4a877efa127e56e81a21f53cfdbbfd3bfbe8c4ff;hp=342cd366cd53ce4b8300e2f7d5cd748b04a21668;hpb=a6cf29fa4dac0909c7582cb1094151d34093ee76;p=mothur.git

diff --git a/degapseqscommand.h b/degapseqscommand.h
deleted file mode 100644
index 342cd36..0000000
--- a/degapseqscommand.h
+++ /dev/null
@@ -1,42 +0,0 @@
-#ifndef DEGAPSEQSCOMMAND_H
-#define DEGAPSEQSCOMMAND_H
-
-/*
- *  degapseqscommand.h
- *  Mothur
- *
- *  Created by westcott on 6/21/10.
- *  Copyright 2010 Schloss Lab. All rights reserved.
- *
- */
-
-
-#include "command.hpp"
-
-class DegapSeqsCommand : public Command {
-public:
-	DegapSeqsCommand(string);
-	DegapSeqsCommand();
-	~DegapSeqsCommand(){}
-	
-	vector<string> setParameters();
-	string getCommandName()			{ return "degap.seqs";		}
-	string getCommandCategory()		{ return "Sequence Processing";		}
-	string getHelpString();	
-	string getCitation() { return "http://www.mothur.org/wiki/Degap.seqs"; }
-	string getDescription()		{ return "removes gap characters from sequences"; }
-
-	int execute(); 
-	void help() { m->mothurOut(getHelpString()); }	
-	
-private:
-
-	bool abort;
-	string fastafile, outputDir;
-	vector<string> outputNames;
-	vector<string> fastaFileNames;
-	
-};
-
-#endif
-