X-Git-Url: https://git.donarmstrong.com/?a=blobdiff_plain;f=deconvolutecommand.h;h=88b7a382d4c175a14c243d21e97a7580cba9c32d;hb=5334a314651228c55fd0f206dec0209bc3148b24;hp=635e53fe455ab05eacdb2a19e09837b30ef4c955;hpb=163b300cfd7d4ca4e70c454be20f07b1d8346650;p=mothur.git

diff --git a/deconvolutecommand.h b/deconvolutecommand.h
index 635e53f..88b7a38 100644
--- a/deconvolutecommand.h
+++ b/deconvolutecommand.h
@@ -19,13 +19,20 @@
 class DeconvoluteCommand : public Command {
 
 public:
-	DeconvoluteCommand(string);	
-	~DeconvoluteCommand() { };
+	DeconvoluteCommand(string);
+	DeconvoluteCommand();
+	~DeconvoluteCommand() {}
+	vector<string> getRequiredParameters();
+	vector<string> getValidParameters();
+	vector<string> getRequiredFiles();
+	map<string, vector<string> > getOutputFiles() { return outputTypes; }
 	int execute();
 	void help();	
 	
 private:
-	string inFastaName, oldNameMapFName;
+	string inFastaName, oldNameMapFName, outputDir;
+	vector<string> outputNames;
+	map<string, vector<string> > outputTypes;
 
 	bool abort;
 };