X-Git-Url: https://git.donarmstrong.com/?a=blobdiff_plain;f=deconvolutecommand.cpp;h=3541e00d064233c4da10619789291222290b33f1;hb=2bb9267aa4b4ecdf8488b06605cc9f3f36fa4332;hp=3fa622f01ff2fc334f5cbb9d79851a9ca7f8b30c;hpb=ae57e166b2ed7b475ec3f466106bd76fabadd063;p=mothur.git

diff --git a/deconvolutecommand.cpp b/deconvolutecommand.cpp
index 3fa622f..3541e00 100644
--- a/deconvolutecommand.cpp
+++ b/deconvolutecommand.cpp
@@ -125,9 +125,15 @@ DeconvoluteCommand::DeconvoluteCommand(string option)  {
 			}
 			
 			oldNameMapFName = validParameter.validFile(parameters, "name", true);
-			if (oldNameMapFName == "not open") { abort = true; }
+			if (oldNameMapFName == "not open") { oldNameMapFName = ""; abort = true; }
 			else if (oldNameMapFName == "not found"){	oldNameMapFName = "";	}
 			else { m->setNameFile(oldNameMapFName); }
+			
+			if (oldNameMapFName == "") {
+				vector<string> files; files.push_back(inFastaName);
+				parser.getNameFile(files);
+			}
+			
 		}
 
 	}