X-Git-Url: https://git.donarmstrong.com/?a=blobdiff_plain;f=decalc.h;fp=decalc.h;h=dca562a24e549a0a640006b97415e27b804c688a;hb=40873e9a7e12d248ebb86e75ca96238c7e7b9701;hp=da0f96cd72b69acf3350a1565f66e7586644ff12;hpb=952a85d59a12e664f5efa6d01681be189e4fff9c;p=mothur.git

diff --git a/decalc.h b/decalc.h
index da0f96c..dca562a 100644
--- a/decalc.h
+++ b/decalc.h
@@ -57,6 +57,8 @@ class DeCalculator {
 		
 		vector<int> returnObviousOutliers(vector< vector<quanMember> >, int);
 		
+		map<int, int> getMaskMap() { return maskMap; }
+		
 	private:
 		//vector<quanMember> sortContrib(map<quanMember*, float>);  //used by mallard
 		float findAverage(vector<float>);
@@ -65,6 +67,7 @@ class DeCalculator {
 		string seqMask;
 		set<int> h;
 		int alignLength;
+		map<int, int> maskMap;
 
 };