X-Git-Url: https://git.donarmstrong.com/?a=blobdiff_plain;f=database.hpp;h=bbe01c456acbb9e66c56127d9bc23371e09b5ddf;hb=d04f948b1a2a1a2984fc4a45d04403b8c121c5bc;hp=3191fdfb02d5323129af949cf1eb50aea50ff3c8;hpb=725a3d4ff2442c79bfde0a75ed3e0904edcf03b7;p=mothur.git diff --git a/database.hpp b/database.hpp index 3191fdf..bbe01c4 100644 --- a/database.hpp +++ b/database.hpp @@ -20,6 +20,7 @@ struct seqMatch { //used to select top n matches int seq; int match; + seqMatch() {} seqMatch(int s, int m) : seq(s), match(m) {} }; /**************************************************************************************************/ @@ -47,6 +48,7 @@ public: virtual ~Database(); virtual void generateDB() = 0; virtual void addSequence(Sequence) = 0; //add sequence to search engine + virtual string getName(int) { return ""; } virtual vector findClosestSequences(Sequence*, int) = 0; // returns indexes of n closest sequences to query virtual vector findClosestMegaBlast(Sequence*, int){return results;} virtual float getSearchScore();