X-Git-Url: https://git.donarmstrong.com/?a=blobdiff_plain;f=database.hpp;fp=database.hpp;h=f9c0c4878c31a67e2df415387f5ee5cf3bbda939;hb=0571957d68cbbc0e425af1db8e808f826010b9e2;hp=a31075b4fddd46ec6d02d32186723a0608b7784d;hpb=77ac47e1ea0b5a0c6f55eb25e6bc7d7494ed3ad2;p=mothur.git diff --git a/database.hpp b/database.hpp index a31075b..f9c0c48 100644 --- a/database.hpp +++ b/database.hpp @@ -52,7 +52,7 @@ public: virtual vector findClosestSequences(Sequence*, int) = 0; // returns indexes of n closest sequences to query virtual vector findClosestMegaBlast(Sequence*, int){return results;} virtual float getSearchScore(); - virtual vector getMegaBlastSearchScores() { return megaScores; } //assumes you already called findClosestMegaBlast + virtual vector getSearchScores() { return Scores; } //assumes you already called findClosestMegaBlast virtual int getLongestBase(); virtual void readKmerDB(ifstream&){}; virtual void setNumSeqs(int i) { numSeqs = i; } @@ -64,7 +64,7 @@ protected: int numSeqs, longest; float searchScore; vector results; - vector megaScores; + vector Scores; }; /**************************************************************************************************/ #endif