X-Git-Url: https://git.donarmstrong.com/?a=blobdiff_plain;f=countseqscommand.h;h=54982c11939e82fae8de341f74c1aa3a01e4f609;hb=49d2b7459c5027557564b21e9487dadafbbbdc96;hp=385cd13536e0ed395bed74d875e620bc131e87c4;hpb=75962c819c16814e5c2340d99af1aa62e564dc20;p=mothur.git diff --git a/countseqscommand.h b/countseqscommand.h index 385cd13..54982c1 100644 --- a/countseqscommand.h +++ b/countseqscommand.h @@ -23,9 +23,11 @@ public: vector setParameters(); string getCommandName() { return "count.seqs"; } string getCommandCategory() { return "Sequence Processing"; } + string getOutputFileNameTag(string, string); string getHelpString(); string getCitation() { return "http://www.mothur.org/wiki/Count.seqs"; } - + string getDescription() { return "counts the number of sequences represented by each unique sequence in a namesfile"; } + int execute(); void help() { m->mothurOut(getHelpString()); }