X-Git-Url: https://git.donarmstrong.com/?a=blobdiff_plain;f=countgroupscommand.h;h=d27a7f8f94ce1577421061e862696de4a4856a2a;hb=e10c72304ee071c0c40e0218a06d89dc4731cbc2;hp=2532a80eca171fefd776e3722474084e42a1f396;hpb=d3aed959ca3b68890eeb7b815e24210bcfeb256c;p=mothur.git

diff --git a/countgroupscommand.h b/countgroupscommand.h
index 2532a80..d27a7f8 100644
--- a/countgroupscommand.h
+++ b/countgroupscommand.h
@@ -23,6 +23,7 @@ public:
 	vector<string> setParameters();
 	string getCommandName()			{ return "count.groups";			}
 	string getCommandCategory()		{ return "Sequence Processing";		}
+	string getOutputFileNameTag(string, string) { return ""; }
 	string getHelpString();	
 	string getCitation() { return "http://www.mothur.org/wiki/Count.groups"; }
 	string getDescription()		{ return "counts the number of sequences in each group"; }
@@ -32,11 +33,9 @@ public:
 	
 	
 private:
-	string sharedfile, groupfile, outputDir, groups, accnosfile;
+	string sharedfile, groupfile, countfile, outputDir, groups, accnosfile;
 	bool abort;
 	vector<string> Groups;
-	
-	void readAccnos();
 };
 
 #endif