X-Git-Url: https://git.donarmstrong.com/?a=blobdiff_plain;f=corraxescommand.h;h=01c8d2bacd223d7c742a28a78fcfa65f91827192;hb=1f7448f6ec056b30ed146a5f779dfd6029788316;hp=507399c9ca4b3b686439bf7e37e7da019244724c;hpb=8af930b692ff87d1b7031fdd5c9a0b88cdd61245;p=mothur.git

diff --git a/corraxescommand.h b/corraxescommand.h
index 507399c..01c8d2b 100644
--- a/corraxescommand.h
+++ b/corraxescommand.h
@@ -29,7 +29,7 @@ public:
 	
 private:
 	GlobalData* globaldata;
-	string axesfile, sharedfile, relabundfile, groups, label, inputFileName, outputDir, method;
+	string axesfile, sharedfile, relabundfile, metadatafile, groups, label, inputFileName, outputDir, method;
 	bool abort, pickedGroups;
 	int numaxes;
 	set<string> names;
@@ -45,6 +45,7 @@ private:
 	int eliminateZeroOTUS(vector<SharedRAbundFloatVector*>&);
 	map<string, vector<float> > readAxes();
 	int calcPearson(map<string, vector<float> >&, ofstream&);
+	int calcSpearman(map<string, vector<float> >&, ofstream&);
 	
 };