X-Git-Url: https://git.donarmstrong.com/?a=blobdiff_plain;f=consensusseqscommand.h;h=1459b43d25bd54b525459721b5de55a5a1d6d9f6;hb=ce8794490ab1d83adcdb2b92e0302a1e43e17adf;hp=fd2f4f535dfa3ca7b4be2c99b2e323a2d4d0b49c;hpb=4de093e3b92bdab1579565cb2873553412f6671e;p=mothur.git diff --git a/consensusseqscommand.h b/consensusseqscommand.h index fd2f4f5..1459b43 100644 --- a/consensusseqscommand.h +++ b/consensusseqscommand.h @@ -1,6 +1,6 @@ #ifndef CONSENSUSSEQSCOMMAND_H #define CONSENSUSSEQSCOMMAND_H - +//test /* * consensusseqscommand.h * Mothur @@ -23,8 +23,11 @@ public: vector setParameters(); string getCommandName() { return "consensus.seqs"; } string getCommandCategory() { return "Sequence Processing"; } + string getOutputFileNameTag(string, string); string getHelpString(); string getCitation() { return "http://www.mothur.org/wiki/Consensus.seqs"; } + string getDescription() { return "create a consensus sequence for each OTU or for a fasta file"; } + int execute(); void help() { m->mothurOut(getHelpString()); }