X-Git-Url: https://git.donarmstrong.com/?a=blobdiff_plain;f=configure.ac;h=fb9b182558a7d8e7723e42fe722e316c6ea9fd48;hb=refs%2Fheads%2Fupstream;hp=522949e39e50207dbb7df6d28724fd73796b6e24;hpb=d54d9ee8883cd106868e1c798542ce4de593f627;p=fastq-tools.git

diff --git a/configure.ac b/configure.ac
index 522949e..fb9b182 100644
--- a/configure.ac
+++ b/configure.ac
@@ -1,5 +1,5 @@
 
-AC_INIT( [fastq-tools], [0.2], [dcjones@cs.washington.ed] )
+AC_INIT( [fastq-tools], [0.6], [dcjones@cs.washington.edu] )
 AM_INIT_AUTOMAKE( [foreign -Wall -Werror] )
 m4_ifdef([AM_SILENT_RULES],[AM_SILENT_RULES([yes])])
 
@@ -8,8 +8,16 @@ AC_CONFIG_MACRO_DIR([m4])
 AC_PROG_CC
 AM_PROG_CC_C_O
 
-opt_CFLAGS="--std=c99 -Wall -Wextra -pedantic -g -O3"
-dbg_CFLAGS="--std=c99 -Wall -Wextra -pedantic -g -O0"
+m4_ifdef([AC_TYPE_UINT8_T],  [AC_TYPE_UINT8_T])
+m4_ifdef([AC_TYPE_UINT16_T], [AC_TYPE_UINT16_T])
+m4_ifdef([AC_TYPE_INT32_T],  [AC_TYPE_INT32_T])
+m4_ifdef([AC_TYPE_UINT32_T], [AC_TYPE_UINT32_T])
+m4_ifdef([AC_TYPE_UINT64_T], [AC_TYPE_UINT64_T])
+m4_ifdef([AC_TYPE_SIZE_T],   [AC_TYPE_SIZE_T])
+m4_ifdef([AC_HEADER_STDBOOL], [AC_HEADER_STDBOOL])
+
+opt_CFLAGS="--std=c99 -Wall -Wextra -pedantic -g -O3 -D_C99_SOURCE"
+dbg_CFLAGS="--std=c99 -Wall -Wextra -pedantic -g -O0 -D_C99_SOURCE"
 
 AC_ARG_ENABLE([debug],
               [AS_HELP_STRING([--enable-debug],
@@ -28,9 +36,6 @@ AC_PROG_LIBTOOL
 AC_CHECK_FUNC(fileno, ,
               AC_MSG_ERROR([The 'fileno' function is missing.]))
 
-# check zlib
-AX_CHECK_ZLIB
-
 # check pcre
 AC_CHECK_PROG(HAVE_PCRE, pcre-config, yes, no)
 if test "x$HAVE_PCRE" = "xno"
@@ -46,10 +51,12 @@ AC_CHECK_HEADER(getopt.h, ,
                 AC_MSG_ERROR([The posix getopt.h header is needed.]))
 
 
+LIBS+="-lm"
 CXXFLAGS=$CFLAGS
 
 AC_CONFIG_FILES([Makefile
                  src/Makefile
+                 tests/Makefile
                  doc/Makefile
                  src/version.h])