X-Git-Url: https://git.donarmstrong.com/?a=blobdiff_plain;f=commandfactory.hpp;fp=commandfactory.hpp;h=e95db8016a4149c9c2defdbb9e7933ff6ee3905a;hb=0caf3fbabaa3ece404f8ce77f4c883dc5b1bf1dc;hp=0000000000000000000000000000000000000000;hpb=1b73ff67c83892a025e597dabd9df6fe7b58206a;p=mothur.git

diff --git a/commandfactory.hpp b/commandfactory.hpp
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+#ifndef COMMANDFACTORY_HPP
+#define COMMANDFACTORY_HPP
+
+/*
+ *  commandfactory.h
+ *  
+ *
+ *  Created by Pat Schloss on 10/25/08.
+ *  Copyright 2008 Patrick D. Schloss. All rights reserved.
+ *
+ */
+
+#include "mothur.h"
+#include "mothurout.h"
+#include "currentfile.h"
+
+class Command;
+
+class CommandFactory {
+public:
+	static CommandFactory* getInstance();
+	Command* getCommand(string, string, string);
+	Command* getCommand(string, string);
+	Command* getCommand(string);
+	//Command* getCommand();
+	bool isValidCommand(string);
+	bool isValidCommand(string, string);
+	void printCommands(ostream&);
+	void setOutputDirectory(string o)		{	outputDir = o;	m->setOutputDir(o);	}
+	void setInputDirectory(string i)		{	inputDir = i;		}
+	void setLogfileName(string n, bool a)	{	logFileName = n;  append = a;		}
+	string getLogfileName()					{	return logFileName; 	}
+	bool getAppend()						{	return append;			}
+	string getOutputDir()					{	return outputDir;		}
+	bool MPIEnabled(string);
+	map<string, string> getListCommands()	{	return commands;		}
+	
+private:
+	Command* command;
+	Command* shellcommand;
+	Command* pipecommand;
+	
+	MothurOut* m;
+	CurrentFile* currentFile;
+	
+	map<string, string> commands;
+	map<string, string>::iterator it;
+	string outputDir, inputDir, logFileName;
+	bool append;
+	
+    int checkForRedirects(string);
+    
+	static CommandFactory* _uniqueInstance;
+	CommandFactory( const CommandFactory& ); // Disable copy constructor
+	void operator=( const CommandFactory& ); // Disable assignment operator
+	CommandFactory();
+	~CommandFactory();
+
+};
+
+#endif