X-Git-Url: https://git.donarmstrong.com/?a=blobdiff_plain;f=commandfactory.hpp;fp=commandfactory.hpp;h=3b6a17e38b2abb74b152da573a9bf2f1666e62e6;hb=2bbb7273d4bf5209f098c764551c6e072d60df36;hp=6f96e90b4813e961222c60f9bb7390188d19c3e5;hpb=438aa88dbc092d9c1c80ec3fa20c8e47f97101c4;p=mothur.git

diff --git a/commandfactory.hpp b/commandfactory.hpp
index 6f96e90..3b6a17e 100644
--- a/commandfactory.hpp
+++ b/commandfactory.hpp
@@ -1,45 +1,45 @@
-#ifndef COMMANDFACTORY_HPP
-#define COMMANDFACTORY_HPP
-
-/*
- *  commandfactory.h
- *  
- *
- *  Created by Pat Schloss on 10/25/08.
- *  Copyright 2008 Patrick D. Schloss. All rights reserved.
- *
- */
-
-#include "mothur.h"
-#include "mothurout.h";
-
-class Command;
-
-class CommandFactory {
-public:
-	static CommandFactory* getInstance();
-	Command* getCommand(string, string);
-	Command* getCommand();
-	bool isValidCommand(string);
-	void printCommands(ostream&);
-	void setOutputDirectory(string o)	{	outputDir = o;		}
-	void setInputDirectory(string i)	{	inputDir = i;		}
-	string getOutputDir()				{	return outputDir;	}
-	bool MPIEnabled(string);
-
-private:
-	Command* command;
-	MothurOut* m;
-	map<string, string> commands;
-	map<string, string>::iterator it;
-	string outputDir, inputDir;
-	
-	static CommandFactory* _uniqueInstance;
-	CommandFactory( const CommandFactory& ); // Disable copy constructor
-	void operator=( const CommandFactory& ); // Disable assignment operator
-	CommandFactory();
-	~CommandFactory();
-
-};
-
-#endif
+#ifndef COMMANDFACTORY_HPP
+#define COMMANDFACTORY_HPP
+
+/*
+ *  commandfactory.h
+ *  
+ *
+ *  Created by Pat Schloss on 10/25/08.
+ *  Copyright 2008 Patrick D. Schloss. All rights reserved.
+ *
+ */
+
+#include "mothur.h"
+#include "mothurout.h"
+
+class Command;
+
+class CommandFactory {
+public:
+	static CommandFactory* getInstance();
+	Command* getCommand(string, string);
+	Command* getCommand();
+	bool isValidCommand(string);
+	void printCommands(ostream&);
+	void setOutputDirectory(string o)	{	outputDir = o;		}
+	void setInputDirectory(string i)	{	inputDir = i;		}
+	string getOutputDir()			{	return outputDir;		}
+	bool MPIEnabled(string);
+
+private:
+	Command* command;
+	MothurOut* m;
+	map<string, string> commands;
+	map<string, string>::iterator it;
+	string outputDir, inputDir;
+	
+	static CommandFactory* _uniqueInstance;
+	CommandFactory( const CommandFactory& ); // Disable copy constructor
+	void operator=( const CommandFactory& ); // Disable assignment operator
+	CommandFactory();
+	~CommandFactory();
+
+};
+
+#endif