X-Git-Url: https://git.donarmstrong.com/?a=blobdiff_plain;f=commandfactory.cpp;h=a40c432f54d18c19e549e9370253fb52dd9ddfa3;hb=44b464979e91c2a1f144ac45ca12c14fcf6579f0;hp=4d2b0ae2b93a6e205ae8b8d24a86dea37c2f6606;hpb=62568a297aaf939ab753334f17abde82ec8e8531;p=mothur.git diff --git a/commandfactory.cpp b/commandfactory.cpp index 4d2b0ae..a40c432 100644 --- a/commandfactory.cpp +++ b/commandfactory.cpp @@ -164,7 +164,7 @@ CommandFactory::CommandFactory(){ commands["clearcut"] = "clearcut"; commands["catchall"] = "catchall"; commands["split.abund"] = "split.abund"; - //commands["cluster.split"] = "cluster.split"; + commands["cluster.split"] = "cluster.split"; commands["classify.seqs"] = "MPIEnabled"; commands["dist.seqs"] = "MPIEnabled"; commands["filter.seqs"] = "MPIEnabled"; @@ -249,7 +249,7 @@ Command* CommandFactory::getCommand(string commandName, string optionString){ else if(commandName == "tree.shared") { command = new TreeGroupCommand(optionString); } else if(commandName == "dist.shared") { command = new MatrixOutputCommand(optionString); } else if(commandName == "bootstrap.shared") { command = new BootSharedCommand(optionString); } - //else if(commandName == "consensus") { command = new ConcensusCommand(optionString); } + else if(commandName == "consensus") { command = new ConcensusCommand(optionString); } else if(commandName == "dist.seqs") { command = new DistanceCommand(optionString); } else if(commandName == "align.seqs") { command = new AlignCommand(optionString); } else if(commandName == "summary.seqs") { command = new SeqSummaryCommand(optionString); } @@ -287,7 +287,7 @@ Command* CommandFactory::getCommand(string commandName, string optionString){ else if(commandName == "clearcut") { command = new ClearcutCommand(optionString); } else if(commandName == "catchall") { command = new CatchAllCommand(optionString); } else if(commandName == "split.abund") { command = new SplitAbundCommand(optionString); } - //else if(commandName == "cluster.split") { command = new ClusterSplitCommand(optionString); } + else if(commandName == "cluster.split") { command = new ClusterSplitCommand(optionString); } else { command = new NoCommand(optionString); } return command;