X-Git-Url: https://git.donarmstrong.com/?a=blobdiff_plain;f=commandfactory.cpp;h=02af6767b00b724459c054839b789798f4b295f7;hb=f06b339c5fc4b6d1b9d2a08fe16bf7670bf7aeb4;hp=54ff4a12d120ddcc482d84876ac53a04f6e3a04a;hpb=957d67f7d8bbadfd2930de061e89fd9b149270fd;p=mothur.git

diff --git a/commandfactory.cpp b/commandfactory.cpp
index 54ff4a1..02af676 100644
--- a/commandfactory.cpp
+++ b/commandfactory.cpp
@@ -289,6 +289,7 @@ CommandFactory::CommandFactory(){
     commands["remove.otulabels"]    = "remove.otulabels";
     commands["make.contigs"]        = "make.contigs";
     commands["load.logfile"]        = "load.logfile";
+    commands["make.table"]          = "make.table";
 	commands["quit"]				= "MPIEnabled"; 
 
 }
@@ -482,7 +483,7 @@ Command* CommandFactory::getCommand(string commandName, string optionString){
 		else if(commandName == "make.shared")			{	command = new SharedCommand(optionString);					}
 		else if(commandName == "get.commandinfo")		{	command = new GetCommandInfoCommand(optionString);			}
 		else if(commandName == "deunique.tree")			{	command = new DeuniqueTreeCommand(optionString);			}
-		else if(commandName == "count.seqs")			{	command = new CountSeqsCommand(optionString);				}
+		else if((commandName == "count.seqs") || (commandName == "make.table"))			{	command = new CountSeqsCommand(optionString);				}
 		else if(commandName == "count.groups")			{	command = new CountGroupsCommand(optionString);				}
 		else if(commandName == "clear.memory")			{	command = new ClearMemoryCommand(optionString);				}
 		else if(commandName == "summary.tax")			{	command = new SummaryTaxCommand(optionString);				}
@@ -636,7 +637,7 @@ Command* CommandFactory::getCommand(string commandName, string optionString, str
 		else if(commandName == "make.shared")			{	pipecommand = new SharedCommand(optionString);					}
 		else if(commandName == "get.commandinfo")		{	pipecommand = new GetCommandInfoCommand(optionString);			}
 		else if(commandName == "deunique.tree")			{	pipecommand = new DeuniqueTreeCommand(optionString);			}
-		else if(commandName == "count.seqs")			{	pipecommand = new CountSeqsCommand(optionString);				}
+		else if((commandName == "count.seqs") || (commandName == "make.table"))			{	pipecommand = new CountSeqsCommand(optionString);				}
 		else if(commandName == "count.groups")			{	pipecommand = new CountGroupsCommand(optionString);				}
 		else if(commandName == "clear.memory")			{	pipecommand = new ClearMemoryCommand(optionString);				}
 		else if(commandName == "summary.tax")			{	pipecommand = new SummaryTaxCommand(optionString);				}
@@ -776,7 +777,7 @@ Command* CommandFactory::getCommand(string commandName){
 		else if(commandName == "make.shared")			{	shellcommand = new SharedCommand();					}
 		else if(commandName == "get.commandinfo")		{	shellcommand = new GetCommandInfoCommand();			}
 		else if(commandName == "deunique.tree")			{	shellcommand = new DeuniqueTreeCommand();			}
-		else if(commandName == "count.seqs")			{	shellcommand = new CountSeqsCommand();				}
+		else if((commandName == "count.seqs") || (commandName == "make.table"))			{	shellcommand = new CountSeqsCommand();				}
 		else if(commandName == "count.groups")			{	shellcommand = new CountGroupsCommand();			}
 		else if(commandName == "clear.memory")			{	shellcommand = new ClearMemoryCommand();			}
 		else if(commandName == "summary.tax")			{	shellcommand = new SummaryTaxCommand();				}